Difference between revisions of "Existing name checking mechanisms"

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[https://www.checklistbank.org/tools/name-match Checklist Bank (GBIF & Catalogue of Life)]
+
==[https://www.checklistbank.org/tools/name-match Checklist Bank (GBIF & Catalogue of Life)]==
 +
Scope: <br />
 +
Software updated: <br />
 +
Codebase/Documentation <br />
 +
Data updated: <br />
 +
Limitation: <br />
 +
Other: <br />
 +
Local ID input returned: <br />
 +
Local Name input returned: <br />
 +
Aggregator name ID returned: <br />
 +
Interactive mode for partial matches: <br />
  
[https://list.worldfloraonline.org/matching.php World Flora Online WFO Plant List]
+
==[https://list.worldfloraonline.org/matching.php World Flora Online WFO Plant List]==
 +
Scope: Plants<br />
 +
Software updated: <br />
 +
Codebase/Documentation <br />
 +
Data updated: <br />
 +
Limitation: <br />
 +
Other: <br />
 +
Local ID input returned: <br />
 +
Local Name input returned: <br />
 +
Aggregator name ID returned: <br />
 +
Interactive mode for partial matches: <br />
  
[https://www.eu-nomen.eu/portal/taxamatch.php PESI]
+
==[https://www.eu-nomen.eu/portal/taxamatch.php PESI]==
 +
Scope: <br />
 +
Software updated: <br />
 +
Codebase/Documentation <br />
 +
Data updated: <br />
 +
Limitation: <br />
 +
Other: <br />
 +
Local ID input returned: <br />
 +
Local Name input returned: <br />
 +
Aggregator name ID returned: <br />
 +
Interactive mode for partial matches: <br />
  
[https://lifewatch.be/en/e-lab LifeWatch]
+
==[https://lifewatch.be/en/e-lab LifeWatch]==
 +
Scope: <br />
 +
Software updated: <br />
 +
Codebase/Documentation <br />
 +
Data updated: <br />
 +
Limitation: <br />
 +
Other: <br />
 +
Local ID input returned: <br />
 +
Local Name input returned: <br />
 +
Aggregator name ID returned: <br />
 +
Interactive mode for partial matches: <br />
 +
 
 +
 
 +
==[https://verifier.globalnames.org/ Global Names]==
 +
Contains options to restrict matching to certain source dataset, among them: <br />
 +
a 2021 Algabase set (but matching doesn’t work) <br />
 +
an (supposedly) up to date Index Fungorum search – the output (HTML, JSON, CSV, TSV) contains a UUID in the „id“ field which is not the „Index Fungorum UUID“, probably a Global Names UUID. But the field „RecordID“ is the „Index Fungorum Registration Identifier“ which in a URL resolves to the name page: http://www.indexfungorum.org/Names/NamesRecord.asp?RecordID=229900 <br />
 +
Scope: defined by stored datasets<br />
 +
Software updated: <br />
 +
Codebase/Documentation <br />
 +
Data updated: <br />
 +
Limitation: 5000 names, at least in interactive mode<br />
 +
Other: Offers a kind of query language that seems to be very flexible<br />
 +
Local ID input returned: <br />
 +
Local Name input returned: <br />
 +
Aggregator name ID returned: <br />
 +
Interactive mode for partial matches: <br />
  
[https://verifier.globalnames.org/ Global Names]
 
  
 
==[http://namematch.science.kew.org/ Kew (IPNI)] <br />==
 
==[http://namematch.science.kew.org/ Kew (IPNI)] <br />==
Scope: Plants (POWO - IPNI offered but not working) <br />
+
Scope: Vascular plants (POWO - IPNI offered but not working) <br />
 
Software updated: ? <br />
 
Software updated: ? <br />
 
Codebase/Documentation ? <br />
 
Codebase/Documentation ? <br />
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==[https://tnrs.biendata.org/ TNRS Taxonomic Name Resolution Service] <br />==
 
==[https://tnrs.biendata.org/ TNRS Taxonomic Name Resolution Service] <br />==
Scope: Plants, WFO and WCVP<br />
+
Scope: Plants, WFO and vascular plants WCVP - potentially more datasets could be included<br />
 
Software updated: v. 5.0 Feb. 24, 2021<br />
 
Software updated: v. 5.0 Feb. 24, 2021<br />
 
Codebase/Documentation: https://github.com/ojalaquellueva/TNRSapi<br />
 
Codebase/Documentation: https://github.com/ojalaquellueva/TNRSapi<br />
Line 35: Line 90:
 
Aggregator name ID returned: NO<br />
 
Aggregator name ID returned: NO<br />
 
Interactive mode for partial matches: YES
 
Interactive mode for partial matches: YES
 +
 +
==[https://legacy.tropicos.org/NameMatching.aspx Tropicos]==
 +
Scope: Plants<br />
 +
Software updated: <br />
 +
Codebase/Documentation <br />
 +
Data updated: <br />
 +
Limitation: <br />
 +
Other: <br />
 +
Local ID input returned: <br />
 +
Local Name input returned: <br />
 +
Aggregator name ID returned: <br />
 +
Interactive mode for partial matches: <br />

Revision as of 14:07, 27 July 2023

(Testing and documentation in progress)


Checklist Bank (GBIF & Catalogue of Life)

Scope:
Software updated:
Codebase/Documentation
Data updated:
Limitation:
Other:
Local ID input returned:
Local Name input returned:
Aggregator name ID returned:
Interactive mode for partial matches:

World Flora Online WFO Plant List

Scope: Plants
Software updated:
Codebase/Documentation
Data updated:
Limitation:
Other:
Local ID input returned:
Local Name input returned:
Aggregator name ID returned:
Interactive mode for partial matches:

PESI

Scope:
Software updated:
Codebase/Documentation
Data updated:
Limitation:
Other:
Local ID input returned:
Local Name input returned:
Aggregator name ID returned:
Interactive mode for partial matches:

LifeWatch

Scope:
Software updated:
Codebase/Documentation
Data updated:
Limitation:
Other:
Local ID input returned:
Local Name input returned:
Aggregator name ID returned:
Interactive mode for partial matches:


Global Names

Contains options to restrict matching to certain source dataset, among them:
a 2021 Algabase set (but matching doesn’t work)
an (supposedly) up to date Index Fungorum search – the output (HTML, JSON, CSV, TSV) contains a UUID in the „id“ field which is not the „Index Fungorum UUID“, probably a Global Names UUID. But the field „RecordID“ is the „Index Fungorum Registration Identifier“ which in a URL resolves to the name page: http://www.indexfungorum.org/Names/NamesRecord.asp?RecordID=229900
Scope: defined by stored datasets
Software updated:
Codebase/Documentation
Data updated:
Limitation: 5000 names, at least in interactive mode
Other: Offers a kind of query language that seems to be very flexible
Local ID input returned:
Local Name input returned:
Aggregator name ID returned:
Interactive mode for partial matches:


Kew (IPNI)

Scope: Vascular plants (POWO - IPNI offered but not working)
Software updated: ?
Codebase/Documentation ?
Data updated: current
Limitation: Not found - tested with 144.000 records
Other: OpenRefine Interface?
Local ID input returned: YES
Local Name input returned: YES
Aggregator name ID returned: YES: IPNI-LSID
Interactive mode for partial matches: NO

TNRS Taxonomic Name Resolution Service

Scope: Plants, WFO and vascular plants WCVP - potentially more datasets could be included
Software updated: v. 5.0 Feb. 24, 2021
Codebase/Documentation: https://github.com/ojalaquellueva/TNRSapi
Data updated: 2023
Limitation: Pasting 5000 names; API-processing unlimited (in batches of 5000)
Other: R package available
Local ID input returned: No
Local Name input returned: YES
Aggregator name ID returned: NO
Interactive mode for partial matches: YES

Tropicos

Scope: Plants
Software updated:
Codebase/Documentation
Data updated:
Limitation:
Other:
Local ID input returned:
Local Name input returned:
Aggregator name ID returned:
Interactive mode for partial matches: