User contributions for GabiDroege

21 May 2026

• 10:3710:37, 21 May 2026 diff hist −1 Research Data Management →At a glance: What is research data and what isn’t current
• 10:3510:35, 21 May 2026 diff hist +1 Research Data Management →At a glance: What is research data and what isn’t

6 May 2026

• 15:0415:04, 6 May 2026 diff hist −31 Research Data Management →At a glance: What is research data and what isn’t
• 15:0315:03, 6 May 2026 diff hist +1,769 N Derivatives of Image-based Data Created page with "'''Nature:''' Derivatives of image-based data include for example * morphometry data derived from measurements of images and statistical analysis thereof * chromosome counts * tables containing characters matrices compiled from image analysis and analyses of these tables * phenotypic data recorded from living plants due to their similar nature and purpose. '''File formats:''' various formats. CSV or Excel for numerical data, or use special software, e.g. for character..." current
• 15:0115:01, 6 May 2026 diff hist −18 Research Data Management No edit summary
• 15:0115:01, 6 May 2026 diff hist −2 Evolutionary Analysis Results No edit summary current
• 14:5714:57, 6 May 2026 diff hist +2,119 N Image-based Data Created page with "'''Nature:''' Image-based data can be classified by the method used to produce them and include * Scanning Electron Microscopy (SEM) images * Light microscopy images * Photographic data: field photos, sample photos, macro photos, etc. * Herbarium image data: Photograph of specimens, labels, spirit collections, fruits, etc. taken during herbarium visits or provided by herbaria that don’t have associated online records or online scans. '''Storage / folder organization'..." current
• 14:5414:54, 6 May 2026 diff hist −24 Research Data Management →At a glance: What is research data and what isn’t
• 14:5014:50, 6 May 2026 diff hist +1,337 N Experimental Data and Lab Methodology Data Created page with "'''Nature:''' Lab-related data encompass various types of experimental and methodological data, such as: * PCR protocols * information on primers * PCR parameters * gel electrophoresis pictures * DNA concentration or quality measures results * flow cytometry results * genome size measurements results * supporting data, e.g. Macrogen order tables, lab progress tracked in a spreadsheet, spreadsheets used to produce dilutions, etc. '''Storage / folder organization:''' St..." current
• 12:1512:15, 6 May 2026 diff hist −22 Research Data Management No edit summary
• 12:1412:14, 6 May 2026 diff hist +2,779 N Evolutionary Analysis Results Created page with "'''Nature:''' Analysis results derived from DNA sequence data, including phylogenetic analyses, networks, biogeography reconstruction., ancestral character state reconstructions, and more. Includes all files related to an analysis, such as matrices, command blocks, scripts, analysis logfiles and outputs, phylogenetic trees, networks and documentation of each analysis. '''File formats:''' Includes various formats provided by analysis software. '''Storage / folder organi..."
• 12:1212:12, 6 May 2026 diff hist −21 DNA Sequences and Derivatives →DNA sequences current
• 12:0612:06, 6 May 2026 diff hist −35 Research Data Management →At a glance: What is research data and what isn’t
• 12:0112:01, 6 May 2026 diff hist +7,713 N DNA Sequences and Derivatives Created page with "DNA sequence data and their derivatives are primarily organized by sequencing methods (Sanger vs. NGS) and by lab code and DNA region, with folders for raw data, processed data and analysis results = DNA sequences = '''Nature:''' pherograms / reads from Sanger sequencing or NGS platforms '''File formats:''' - Sanger sequences: Pherograms: *.scf for own sequences, *.abi format (can be converted in scf) - NGS: *.fastq.gz '''Storage / folder organization:''' - Sanger se..."
• 11:5511:55, 6 May 2026 diff hist −32 Research Data Management →At a glance: What is research data and what isn’t
• 11:5411:54, 6 May 2026 diff hist +2,104 N Sample Metadata and Sampling Information Created page with "'''Nature:''' Sample origin data (e.g., locality) and various identifiers associated with it, e.g., labcode, tissue ID (BGT- number), DB number, voucher ID (herbarium barcode, internal or external if available). This category also encompasses sampling lists for subprojects, sampling wish lists, sample lists obtained from other sources (e.g., collaborators, datasets from herbaria, records downloaded from databases, BoGart exports, and similar). Tables that track lab work..." current
• 11:5111:51, 6 May 2026 diff hist −15 m MediaWiki:Sidebar No edit summary current
• 11:5011:50, 6 May 2026 diff hist +70 m MediaWiki:Sidebar added RDM page
• 11:4611:46, 6 May 2026 diff hist +6,347 N Research Data Management Created page with "= Introduction = Research Data Management (RDM) is an integral part of the research process. It encompasses: * Organisation and documentation: Systematic arrangement and thorough documentation of data to ensure it is understandable and useable. * Storage: Storing data in a manner that ensures its integrity and accessibility over time. * Backup and archiving: Regular backups to prevent data loss and archiving for long-term preservation. * Sharing and publication: Making d..."

23 July 2021

• 14:4814:48, 23 July 2021 diff hist +183 ENA Submission Pipeline →Most common software errors current
• 14:0314:03, 23 July 2021 diff hist +201 ENA Submission Pipeline →Most common software errors
• 12:3412:34, 23 July 2021 diff hist +58 Internal:JACQ-Eingabe Konventionen →Abnahme und Versand von Gewebe current
• 12:3312:33, 23 July 2021 diff hist +194 Internal:JACQ-Eingabe Konventionen →Abnahme und Versand von Gewebe

18 July 2021

• 11:5511:55, 18 July 2021 diff hist −10 m Collection Data Form No edit summary current
• 11:5411:54, 18 July 2021 diff hist −5 m ENA Submission Pipeline No edit summary

20 April 2021

• 11:0011:00, 20 April 2021 diff hist +29 N Internal:ENA Annotations GabiDroege moved page Internal:ENA Annotations to ENA Annotations current
• 11:0011:00, 20 April 2021 diff hist 0 m ENA Annotations GabiDroege moved page Internal:ENA Annotations to ENA Annotations current

15 April 2021

• 15:1815:18, 15 April 2021 diff hist +37 N Internal:ENA Submission Pipeline GabiDroege moved page Internal:ENA Submission Pipeline to ENA Submission Pipeline current
• 15:1815:18, 15 April 2021 diff hist 0 m ENA Submission Pipeline GabiDroege moved page Internal:ENA Submission Pipeline to ENA Submission Pipeline
• 13:2013:20, 15 April 2021 diff hist −1 MediaWiki:Sidebar No edit summary
• 13:2013:20, 15 April 2021 diff hist +11 MediaWiki:Sidebar No edit summary
• 13:1913:19, 15 April 2021 diff hist +12 MediaWiki:Sidebar No edit summary
• 13:0813:08, 15 April 2021 diff hist +22 N Internal:Contacts GabiDroege moved page Internal:Contacts to Contacts: can go public current
• 13:0813:08, 15 April 2021 diff hist 0 m Contacts GabiDroege moved page Internal:Contacts to Contacts: can go public current

30 March 2021

• 10:2810:28, 30 March 2021 diff hist +128 ENA Annotations No edit summary

18 March 2021

• 13:2013:20, 18 March 2021 diff hist +110 ENA Submission Pipeline →Validating EMBL flatfile
• 12:5412:54, 18 March 2021 diff hist −1 ENA Annotations →trnK-matK
• 12:2912:29, 18 March 2021 diff hist +100 ENA Submission Pipeline →Most common software errors
• 12:2512:25, 18 March 2021 diff hist −57 ENA Submission Pipeline →Check all taxon names against NCBI Taxonomy
• 12:2412:24, 18 March 2021 diff hist −59 ENA Submission Pipeline No edit summary
• 12:2412:24, 18 March 2021 diff hist +59 ENA Submission Pipeline →Final submission
• 12:2312:23, 18 March 2021 diff hist +35 ENA Submission Pipeline →Add Annotations to Sequences
• 12:2212:22, 18 March 2021 diff hist −14 ENA Submission Pipeline →Check all taxon names against NCBI Taxonomy
• 12:2112:21, 18 March 2021 diff hist −473 ENA Submission Pipeline →Überprüfung der Korrespondenz zwischen DNA-Alignment und Metadaten
• 12:2112:21, 18 March 2021 diff hist +2 ENA Submission Pipeline →Mandatory conventions for non-canonical names
• 12:2012:20, 18 March 2021 diff hist −84 ENA Submission Pipeline →Registration of all new names at NCBI/ENA
• 12:1612:16, 18 March 2021 diff hist +447 ENA Submission Pipeline →Converting DNA alignment (nexus file) to EMBL flate file, integration of metadata
• 11:3911:39, 18 March 2021 diff hist +78 ENA Submission Pipeline →Converting DNA alignment (nexus file) to EMBL flate file, integration of metadata

16 March 2021

• 12:3312:33, 16 March 2021 diff hist +97 ENA Annotations No edit summary
• 12:3112:31, 16 March 2021 diff hist +1,353 N ENA Annotations Created page with "Annotations must follow the INSDC vocabulary (http://www.insdc.org/files/feature_table.html): =trnG= CharSet trnG_tRNA = 1-13; CharSet trnG_exon = 1-13; CharSet trnGIGS_misc_..."