Difference between revisions of "Best Practice Handbook"
From reBiND Documentation
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* Case studies with single data sets from different providers ([[ReBiND_Stories| reBiND stories]]) | * Case studies with single data sets from different providers ([[ReBiND_Stories| reBiND stories]]) | ||
* General observations | * General observations | ||
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== Supporting data preparation == | == Supporting data preparation == | ||
Revision as of 18:32, 21 October 2014
Contents
- 1 Introduction
- 2 The reBiND workflow
- 3 System Installation and Administration (Technical information for administrators and IT specialists)
- 4 Data Archiving (Information for content administrators and contributing scientists)
- 5 Case Studies
- 6 Supporting data preparation
- 7 Technical Background
- 8 Glossary
- 9 References
Introduction
- About reBiND
- How to use this manual
The reBiND workflow
System Installation and Administration (Technical information for administrators and IT specialists)
Data Archiving (Information for content administrators and contributing scientists)
- Workflow
- Data Preparation
- Prepare the content for ABCD mapping: resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata, denormalise
- ABCD Mapping (see BioCASE documentation) plus additional examples
- Creating a new project and uploading data to the reBiND data portal
- Validation and Corrections
- Reviewing the XML file (Some notes on manual review)
- Entering metadata
- Publishing and searching the data
- Data Preparation
Case Studies
- Case studies with single data sets from different providers ( reBiND stories)
- General observations
