reBiND Documentation
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Best Practice Handbook
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2015-01-14T14:57:40Z
AgnesKirchhoff
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/* Data Archiving (Information for content administrators and contributing scientists) */
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=reBiND Best Practice Handbook=
==Introduction==
* [[About reBiND]]
* [[Introduction|How to use this manual]]
==The reBiND workflow==
* [[Overview_rebind_workflow#Overview_of_the_reBiND_workflow|An overview of the reBiND pipeline]]
==System Installation and Administration (Technical information for administrators and IT specialists)==
* [[Installation]]
* [[Administration]]
* [[Data Rescue - outdated software and hardware]]
==Data Archiving (Information for content administrators and contributing scientists) ==
* [[Data_preparation|Data Preparation]]
* [[Creating_new_rebind_project|Creating a new project]]
* [[Data_upload_to_rebind_framework|Uploading data to the reBiND data portal - files less than 1000 ABCD units]]
* [[Exporting_XML_files_from_BPS| Uploading data to the reBiND data portal - files greater than 1000 ABCD units]]
* [[Validation_and_Corrections |Validation and Corrections]]
* [[Manual_review_of_data |Manual review of the data file]]
* [[Entering_metadata |Entering metadata]]
* [[Publishing_and_searching_the_data |Publishing and searching the data]]
==Case Studies==
* [[Case studies with single data sets from different providers ]]
== Supporting data preparation ==
* [[Supporting_data_preparation_software|Software Products]]
* [[Supporting procedures|Supporting data preparation procedures]]
==Technical Background==
*[[eXist_and_xquery|eXist and xquery]]
*[[Ecologial Metadata Language]]
*[[ABCD Access to Biological Collection Data, Standard]]
==Glossary==
* [[Glossary|A description of some of the terms used in this manual]]
==References==
* Güntsch, A., Fichtmüller, D., Kirchhoff, A. & Berendsohn, W.G.: Efficient rescue of threatened biodiversity data using reBiND-workflows. In: Plant Biosystems, 146(4) (2012), S. 752-755, DOI:10.1080/11263504.2012.740086
* The BioCASE Provider Software Documentation: http://wiki.bgbm.org/bps/index.php/Main_Page
* BioCASE Biological Collection Access Service: http://www.biocase.org/
* ABCD Schema (Access ot Biological Collection Data); ABCD 2.0 Concepts: http://wiki.tdwg.org/twiki/bin/view/ABCD/AbcdConcepts
* GBIF (Global Biodiversity Information Facility): http://www.gbif.org/
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