Join the Network - Revision history

A.Plank: fix Wiki syntax: problematic double ** (list items) were regarded as «:*» (indented blocks)

2023-01-09T12:07:04Z

fix Wiki syntax: problematic double ** (list items) were regarded as «:*» (indented blocks)

KatharineBarker at 14:13, 30 March 2020

2020-03-30T14:13:07Z

← Older revision		Revision as of 16:13, 30 March 2020
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	Providers from all over the world are invited to make their genomic samples (tissues & DNA) and data available regardless of whether the focus is on a narrow or wide geographic area, a particular taxonomic group or an entire kingdom.		Providers from all over the world are invited to make their genomic samples (tissues, DNA, environmental samples, cell cultures etc) and data available regardless of whether the focus is on a narrow or wide geographic area, a particular taxonomic group or an entire kingdom.

	The web portal is now established and open for the integration of collections worldwide.		The web portal is now established and open for the integration of collections worldwide.

KatharineBarker: /* Advantages */

2020-03-30T14:11:03Z

Advantages

← Older revision		Revision as of 16:11, 30 March 2020
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	The web portal is now established and open for the integration of collections worldwide.		The web portal is now established and open for the integration of collections worldwide.

	~~=Advantages=~~

	* Non-human DNA and tissue samples with relevant digital voucher images including full documentation can be provided via a '''central web portal''', thus improving efficient searching for GBIF-referenced tissue and DNA samples.		=Member Benefits=

	* ~~Original sample~~ and ~~specimen '''data remain locally'''~~ to administrators in specimen databases held by the collection providers but are made available via a centralised search engine. Queries are made using the approved GBIF wrapper. For accelerated searches, ~~an '''index database''' of the portal holds some parameters (indexed) that are periodically updated.~~		**Technical support for genomic collection standardization and discoverability
			**Bi-annual usage and reporting statistics on collections made discoverable through GGBN
			**Active participation in GGBN governance and decision-making processes
			**Eligibility to funding opportunities through GGBN awards programs and for fundraising support
			**Specialized access to biodiversity biobanking resources, such as webinars, forums, and workshops, along with access to other network members

	* ~~DNA samples of interest can be compiled '''easily into a pre-order'''~~ by a ~~potential customer~~. ~~The pre-order will then be directed~~ to the ~~provider/collection holder of~~ the ~~DNA samples~~. ~~The sample provider is responsible~~ for ~~making a binding offer~~, ~~negotiating the terms~~, and ~~finally processing the order~~.		Based on direct benefits received, GGBN members will receive the following indirect benefits:
			**Raised Institutional Member Profile. Increases institutional credibility by participating in a network of leading institutions that share focuses on transparency and compliance with legal measures and sets the global standard for biodiversity biobanking.
			**Greater Visibility and Impact. Increases sample discoverability, driving added value, use and relevance of your genetic collection.
			**Sharing Best Practices. Facilitates management and stewardship of genetic and other molecular samples and their derivatives, at the institutional level.
			**Knowledge Exchange. Provides training and access to the document library and other resources. Enables networking with potential collaborators through conferences, workshops, and working groups.
			**Strategic Relationships. Facilitates collections growth by networking with the research community. Access to expertise in biobanking, collections, and data discoverability through GGBN’s partners, such as Consortium of European Taxonomic Facilities (CETAF), Global Biodiversity Information Facility (GBIF), European, Middle Eastern and African Society for Biopreservation and Biobanking (ESBB), International Nucleotide Sequence Database Collaboration (INSDC), and International Society for Biological and Environmental Biorepositories (ISBER).

	* Standard [https://160.45.63.11/share/s/AeJP2ZiDR3ShS9a7qZwmyA Material Transfer Agreements (MTAs)] are available via GGBN's document library, as part of GGBN's Access and Benefit Sharing Guidance package.		=Partner Benefits=

	* GGBN ~~[https://160.45.63.11/share/s/UM5JietQR9aevtYDymHbjw Code of Conduct] and guidance~~ on ~~[https://160.45.63.11/share/s/546zVMjjQTKnv44IqXvkGQ Best Practice] are also available via GGBN's document library, as part~~ of ~~GGBN's Access and Benefit Sharing Guidance package.~~		**Strategic partner alliances with GGBN to facilitate collaboration on activities related to biodiversity biobanking of genomic samples for research
			**Access to GGBN’s newsletter and other GGBN communications
	* DNA and tissue samples ~~within collections can be '''(temporarily) blocked''' from delivery. These samples are searchable but can not be ordered.~~		**Access to letters of support and promotional opportunities from GGBN, including observer logos posted on GGBN’s website

	* ~~As another '''special feature''' tissue samples and specimens suitable for '''on-demand DNA extraction''' can also be offered.~~

	* ~~DNA samples can be '''linked~~ to~~''' additional information such as '''GenBank'''~~ and ~~'''BOLD''' entries or '''publications'''.~~

	* ~~The cooperation is at present '''free~~ of ~~charge'''~~ and ~~is easily accomplished if collection databases are GBIF compatible.~~

	=Requirements=		=Requirements=

WikiSysop: /* Process of Participation */

2018-01-17T16:04:48Z

Process of Participation

← Older revision		Revision as of 18:04, 17 January 2018
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	=Process of Participation=		=Process of Participation=

	Step 1. [[Contact_Us Contact Us]]		Step 1. [[Contact_Us \| Contact Us]]

	Step 2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.		Step 2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.

WikiSysop: /* Process of Participation */

2015-12-15T17:33:28Z

Process of Participation

← Older revision		Revision as of 19:33, 15 December 2015
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	=Process of Participation=		=Process of Participation=

	Step 1. [[~~http://wiki.ggbn.org/ggbn/~~Contact_Us Contact Us]]		Step 1. [[Contact_Us Contact Us]]

	Step 2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.		Step 2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.

KatharineBarker: /* Process of Participation */

2015-12-09T17:14:37Z

Process of Participation

← Older revision		Revision as of 19:14, 9 December 2015
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	=Process of Participation=		=Process of Participation=

	Step 1. [[~~Special~~:Contact ~~\| Contact us~~]]		Step 1. [[http://wiki.ggbn.org/ggbn/Contact_Us Contact Us]]

	Step 2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.		Step 2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.

KatharineBarker: /* Advantages */

2015-12-09T17:12:38Z

Advantages

← Older revision		Revision as of 19:12, 9 December 2015
Line 4:		Line 4:

	=Advantages=		=Advantages=
	- Non-human DNA and tissue samples with relevant digital voucher images including full documentation can be provided via a '''central web portal''', thus improving efficient searching for GBIF-referenced tissue and DNA samples.
			* Non-human DNA and tissue samples with relevant digital voucher images including full documentation can be provided via a '''central web portal''', thus improving efficient searching for GBIF-referenced tissue and DNA samples.

	* Original sample and specimen '''data remain locally''' to administrators in specimen databases held by the collection providers but are made available via a centralised search engine. Queries are made using the approved GBIF wrapper. For accelerated searches, an '''index database''' of the portal holds some parameters (indexed) that are periodically updated.		* Original sample and specimen '''data remain locally''' to administrators in specimen databases held by the collection providers but are made available via a centralised search engine. Queries are made using the approved GBIF wrapper. For accelerated searches, an '''index database''' of the portal holds some parameters (indexed) that are periodically updated.

KatharineBarker at 17:11, 9 December 2015

2015-12-09T17:11:45Z

← Older revision		Revision as of 19:11, 9 December 2015
Line 1:		Line 1:
	Providers from all over the world are invited to make their DNA ~~samples~~ and data available regardless of whether the focus is on a narrow or wide geographic area, a particular taxonomic group or an entire kingdom.		Providers from all over the world are invited to make their genomic samples (tissues & DNA) and data available regardless of whether the focus is on a narrow or wide geographic area, a particular taxonomic group or an entire kingdom.

	The web portal ~~which was initially set-up with four German partners,~~ is now established and open for the integration of ~~further~~ collections worldwide.		The web portal is now established and open for the integration of collections worldwide.

	=Advantages=		=Advantages=
	- Non-human DNA and tissue samples with relevant digital voucher images including full documentation can be provided via a '''central web portal''', thus improving efficient searching for GBIF-referenced DNA samples.		- Non-human DNA and tissue samples with relevant digital voucher images including full documentation can be provided via a '''central web portal''', thus improving efficient searching for GBIF-referenced tissue and DNA samples.

	- Original sample and specimen '''data remain locally''' to administrators in specimen databases held by the collection providers but are made available via a centralised search engine. Queries are made using the approved GBIF wrapper. For accelerated searches, an '''index database''' of the portal holds some parameters (indexed) that are periodically updated.		* Original sample and specimen '''data remain locally''' to administrators in specimen databases held by the collection providers but are made available via a centralised search engine. Queries are made using the approved GBIF wrapper. For accelerated searches, an '''index database''' of the portal holds some parameters (indexed) that are periodically updated.

	- DNA samples of interest can be compiled '''easily into a pre-order''' by a potential customer. The pre-order will then be directed to the provider/collection holder of the DNA samples. The sample provider is responsible for making a binding offer, negotiating the terms, and finally processing the order.		* DNA samples of interest can be compiled '''easily into a pre-order''' by a potential customer. The pre-order will then be directed to the provider/collection holder of the DNA samples. The sample provider is responsible for making a binding offer, negotiating the terms, and finally processing the order.

	~~- A sample~~ [~~http~~://~~www~~.~~dnabank-network~~.~~org~~/~~publications~~/~~Agreement_on_the_supply_of_DNA_material.pdf~~ Material Transfer ~~Agreement~~ (~~MTA~~)] ~~agreed by the founding partners is~~ available via ~~the portal. A link to differing MTAs can also be provided~~.		* Standard [https://160.45.63.11/share/s/AeJP2ZiDR3ShS9a7qZwmyA Material Transfer Agreements (MTAs)] are available via GGBN's document library, as part of GGBN's Access and Benefit Sharing Guidance package.

	~~- DNA~~ and ~~tissue samples within collections can be~~ ''~~'(temporarily) blocked''' from delivery. These samples are searchable but can not be ordered~~.		* GGBN [https://160.45.63.11/share/s/UM5JietQR9aevtYDymHbjw Code of Conduct] and guidance on [https://160.45.63.11/share/s/546zVMjjQTKnv44IqXvkGQ Best Practice] are also available via GGBN's document library, as part of GGBN's Access and Benefit Sharing Guidance package.

	~~- As another '''special feature'''~~ tissue samples ~~and specimens suitable for~~ '''~~on-demand DNA extraction~~''' can ~~also~~ be ~~offered~~.		* DNA and tissue samples within collections can be '''(temporarily) blocked''' from delivery. These samples are searchable but can not be ordered.

	~~- DNA samples can be~~ '''~~linked to''' additional information such as '''GenBank~~''' and '''~~BOLD''' entries or '''publications~~'''.		* As another '''special feature''' tissue samples and specimens suitable for '''on-demand DNA extraction''' can also be offered.

	- The cooperation is at present '''free of charge''' and is easily accomplished if collection databases are GBIF compatible.		* DNA samples can be '''linked to''' additional information such as '''GenBank''' and '''BOLD''' entries or '''publications'''.

			* The cooperation is at present '''free of charge''' and is easily accomplished if collection databases are GBIF compatible.

	=Requirements=		=Requirements=
	~~- DNA and tissue collections preferably from scientific collections or biological resource centres with molecular laboratory units.~~

	~~- Accordance~~ and ~~legal compliance~~ with ~~international species protection and trade conventions such as [http://www.cbd.int/default.shtml CBD] or [http://www.cites.org/ CITES] as well as national conservation law is implicit~~.		* DNA and tissue collections preferably from scientific collections or biological resource centres with molecular laboratory units.

	~~- A minimum of 500 DNA samples per provider have to be made available~~. ~~The same applies for tissues~~ or ~~specimens for on-demand DNA extraction~~.		* Accordance and legal compliance with international species protection and trade conventions such as [http://www.cbd.int/default.shtml CBD] or [http://www.cites.org/ CITES] as well as national conservation law is implicit.

	- Most of all offered samples should be available when the database of the new partner is made accessible. Further samples can be blocked for up to two years or longer.		* A minimum of 500 tissue or DNA samples per provider have to be made available. The same applies for tissues or specimens for on-demand DNA extraction.

			* Most of all offered samples should be available when the database of the new partner is made accessible. Further samples can be blocked for up to two years or longer.

	=Process of Participation=		=Process of Participation=
	~~1. [[Special:Contact \| Contact us]]~~

	2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.		Step 1. [[Special:Contact \| Contact us]]

			Step 2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.

	3. The DNA sample database of the new provider will be indexed.		Step 3. The tissue and DNA sample database of the new provider will be indexed.

	4. DNA samples are searchable and can be ordered via the web portal.		Step 4. Tissue and DNA samples are searchable and can be ordered via the web portal.

WikiSysop: /* Process of Participation */

2015-12-08T19:46:36Z

Process of Participation

← Older revision		Revision as of 21:46, 8 December 2015
Line 32:		Line 32:
	1. [[Special:Contact \| Contact us]]		1. [[Special:Contact \| Contact us]]

	2. [[IT ~~Requirements~~ \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.		2. [[IT requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.

	3. The DNA sample database of the new provider will be indexed.		3. The DNA sample database of the new provider will be indexed.

	4. DNA samples are searchable and can be ordered via the web portal.		4. DNA samples are searchable and can be ordered via the web portal.

WikiSysop: /* Process of Participation */

2015-12-08T19:46:25Z

Process of Participation

← Older revision		Revision as of 21:46, 8 December 2015
Line 32:		Line 32:
	1. [[Special:Contact \| Contact us]]		1. [[Special:Contact \| Contact us]]

	2. [IT Requirements \| IT requirements] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.		2. [[IT Requirements \| IT requirements]] and metadata for DNA sample database have to be implemented by all partners. Support will be provided by GGBN.

	3. The DNA sample database of the new provider will be indexed.		3. The DNA sample database of the new provider will be indexed.

	4. DNA samples are searchable and can be ordered via the web portal.		4. DNA samples are searchable and can be ordered via the web portal.

← Older revision		Revision as of 14:07, 9 January 2023
Line 6:		Line 6:
	=Member Benefits=		=Member Benefits=

	**Technical support for genomic collection standardization and discoverability		:* Technical support for genomic collection standardization and discoverability
	**Bi-annual usage and reporting statistics on collections made discoverable through GGBN		:* Bi-annual usage and reporting statistics on collections made discoverable through GGBN
	**Active participation in GGBN governance and decision-making processes		:* Active participation in GGBN governance and decision-making processes
	**Eligibility to funding opportunities through GGBN awards programs and for fundraising support		:* Eligibility to funding opportunities through GGBN awards programs and for fundraising support
	**Specialized access to biodiversity biobanking resources, such as webinars, forums, and workshops, along with access to other network members		:* Specialized access to biodiversity biobanking resources, such as webinars, forums, and workshops, along with access to other network members

	Based on direct benefits received, GGBN members will receive the following indirect benefits:		Based on direct benefits received, GGBN members will receive the following indirect benefits:
	**Raised Institutional Member Profile. Increases institutional credibility by participating in a network of leading institutions that share focuses on transparency and compliance with legal measures and sets the global standard for biodiversity biobanking.		:* Raised Institutional Member Profile. Increases institutional credibility by participating in a network of leading institutions that share focuses on transparency and compliance with legal measures and sets the global standard for biodiversity biobanking.
	**Greater Visibility and Impact. Increases sample discoverability, driving added value, use and relevance of your genetic collection.		:* Greater Visibility and Impact. Increases sample discoverability, driving added value, use and relevance of your genetic collection.
	**Sharing Best Practices. Facilitates management and stewardship of genetic and other molecular samples and their derivatives, at the institutional level.		:* Sharing Best Practices. Facilitates management and stewardship of genetic and other molecular samples and their derivatives, at the institutional level.
	**Knowledge Exchange. Provides training and access to the document library and other resources. Enables networking with potential collaborators through conferences, workshops, and working groups.		:* Knowledge Exchange. Provides training and access to the document library and other resources. Enables networking with potential collaborators through conferences, workshops, and working groups.
	**Strategic Relationships. Facilitates collections growth by networking with the research community. Access to expertise in biobanking, collections, and data discoverability through GGBN’s partners, such as Consortium of European Taxonomic Facilities (CETAF), Global Biodiversity Information Facility (GBIF), European, Middle Eastern and African Society for Biopreservation and Biobanking (ESBB), International Nucleotide Sequence Database Collaboration (INSDC), and International Society for Biological and Environmental Biorepositories (ISBER).		:* Strategic Relationships. Facilitates collections growth by networking with the research community. Access to expertise in biobanking, collections, and data discoverability through GGBN’s partners, such as Consortium of European Taxonomic Facilities (CETAF), Global Biodiversity Information Facility (GBIF), European, Middle Eastern and African Society for Biopreservation and Biobanking (ESBB), International Nucleotide Sequence Database Collaboration (INSDC), and International Society for Biological and Environmental Biorepositories (ISBER).

	=Partner Benefits=		=Partner Benefits=

	**Strategic partner alliances with GGBN to facilitate collaboration on activities related to biodiversity biobanking of genomic samples for research		:* Strategic partner alliances with GGBN to facilitate collaboration on activities related to biodiversity biobanking of genomic samples for research
	**Access to GGBN’s newsletter and other GGBN communications		:* Access to GGBN’s newsletter and other GGBN communications
	**Access to letters of support and promotional opportunities from GGBN, including observer logos posted on GGBN’s website		:* Access to letters of support and promotional opportunities from GGBN, including observer logos posted on GGBN’s website

	=Requirements=		=Requirements=

	* DNA and tissue collections preferably from scientific collections or biological resource centres with molecular laboratory units.		* DNA and tissue collections preferably from scientific collections or biological resource centres with molecular laboratory units.

	* Accordance and legal compliance with international species protection and trade conventions such as [http://www.cbd.int/default.shtml CBD] or [http://www.cites.org/ CITES] as well as national conservation law is implicit.		* Accordance and legal compliance with international species protection and trade conventions such as [http://www.cbd.int/default.shtml CBD] or [http://www.cites.org/ CITES] as well as national conservation law is implicit.

	* A minimum of 500 tissue or DNA samples per provider have to be made available. The same applies for tissues or specimens for on-demand DNA extraction.		* A minimum of 500 tissue or DNA samples per provider have to be made available. The same applies for tissues or specimens for on-demand DNA extraction.
			* Most of all offered samples should be available when the database of the new partner is made accessible. Further samples can be blocked for up to two years or longer.

	* Most of all offered samples should be available when the database of the new partner is made accessible. Further samples can be blocked for up to two years or longer.

	=Process of Participation=		=Process of Participation=
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	Step 4. Tissue and DNA samples are searchable and can be ordered via the web portal.		Step 4. Tissue and DNA samples are searchable and can be ordered via the web portal.


			[[Category: Help]]