Difference between revisions of "Best Practice Handbook"

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(Data Rescue, Preparation)
(Data Archiving)
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*workflow
 
*workflow
 
** Data Preparation
 
** Data Preparation
 +
***content
 
notes: content - resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata,  
 
notes: content - resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata,  
 +
***ABCD Mapping
 
** XML Export
 
** XML Export
 
** Import to reBiND Framework
 
** Import to reBiND Framework

Revision as of 11:41, 8 April 2014

Introduction

  • about reBiND
  • how to use this book

System Installation

  • Installing BioCASe Provider Software
  • Installing eXist
  • Installing reBiND Framework
  • Configuring eXist/reBiND Framework
  • Using a custom data format
  • Using the Correction Tool
  • Writing Custom Correction Modules
  • Using a different metadata format

Technical Background

  • eXist
  • XQuery
  • ABCD
  • EML

Data Archiving

  • workflow
    • Data Preparation
      • content

notes: content - resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata,

      • ABCD Mapping
    • XML Export
    • Import to reBiND Framework
    • Run Corrections
    • data review by the scientist
    • enter metadata
    • publish

Best Practice Documentation


Data Rescue, Preparation

Case Studies

Related Software Products

  • Data Splitter
  • Character Encoding Correcter
  • Stand-alone Correction Manager

Glossary

References