Difference between revisions of "Best Practice Handbook"

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(a bit more specific on some chapters)
(Data Archiving)
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*workflow
 
*workflow
 
** Data Preparation
 
** Data Preparation
 +
notes: content - resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata,
 
** XML Export
 
** XML Export
 
** Import to reBiND Framework
 
** Import to reBiND Framework

Revision as of 14:50, 11 March 2014

Introduction

  • about reBiND
  • how to use this book

System Installation

  • Installing BioCASe Provider Software
  • Installing eXist
  • Installing reBiND Framework
  • Configuring eXist/reBiND Framework
  • Using a custom data format
  • Using the Correction Tool
  • Writing Custom Correction Modules
  • Using a different metadata format

Technical Background

  • eXist
  • XQuery
  • ABCD
  • EML

Data Archiving

  • workflow
    • Data Preparation

notes: content - resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata,

    • XML Export
    • Import to reBiND Framework
    • Run Corrections
    • data review by the scientist
    • enter metadata
    • publish

Best Practice Documentation


Data Rescue, Preparation

Case Studies

Related Software Products

  • Data Splitter
  • Character Encoding Correcter
  • Stand-alone Correction Manager

Glossary

References