Difference between revisions of "Best Practice Handbook"
From reBiND Documentation
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***prepare the content for ABCD mapping: resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata, denormalise | ***prepare the content for ABCD mapping: resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata, denormalise | ||
***ABCD Mapping (see BioCASE documentation) plus additional examples | ***ABCD Mapping (see BioCASE documentation) plus additional examples | ||
| − | ** XML Export | + | ** XML Export from BioCASE provider software (mention other like Pentaho Kettle?) |
** Import to reBiND Framework | ** Import to reBiND Framework | ||
*** Import from XML file system | *** Import from XML file system | ||
Revision as of 11:58, 8 April 2014
Contents
Introduction
- about reBiND
- how to use this book
System Installation
- Installing BioCASe Provider Software
- Installing eXist
- Installing reBiND Framework
- Configuring eXist/reBiND Framework
- Using a custom data format
- Using the Correction Tool
- Documentation of Correction Modules
- Writing Custom Correction Modules
- Using a different metadata format
Technical Background
- eXist
- XQuery
- ABCD
- EML
Data Archiving
- workflow
- Data Preparation
- prepare the content for ABCD mapping: resolve abbreviations, add units, concatenate atomised scientific name, additional information from data documentation, add metadata, denormalise
- ABCD Mapping (see BioCASE documentation) plus additional examples
- XML Export from BioCASE provider software (mention other like Pentaho Kettle?)
- Import to reBiND Framework
- Import from XML file system
- Connect to BioCASE and upload XML
- Run Corrections
- data review by the scientist
- enter metadata
- publish
- Data Preparation
Best Practice Documentation
Data Rescue, Preparation
- data formats
- Identifying Unknown File Formats
- Conversion for selected file formats
- DataPerfect
- Paradox
- dBase
- Harvard Graphics
- Word 3 for DOS
- Excel to Access database
- Document new data formats for others
- hardware
- 3.5" Floppies
- 5.25 " Floppies
- preparation
Case Studies
Related Software Products
- Data Splitter
- Character Encoding Correcter
- Stand-alone Correction Manager
